BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025B08LP1|AL428334
(874 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig848 1702 0.0
>3x_Contig848
Length = 3091
Score = 1702 bits (858), Expect = 0.0
Identities = 873/876 (99%), Gaps = 2/876 (0%)
Strand = Plus / Minus
Query: 1 gatccagaatagagc-actgaacaaataacaggatgcaagaatttcttatacttaggatt 59
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2776 gatccagaatagagccactgaacaaataacaggatgcaagaatttcttatacttaggatt 2717
Query: 60 tggcaataatggtgcatcggtgacgatgaagaacatgcaaatggcggtaaatagttggaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2716 tggcaataatggtgcatcggtgacgatgaagaacatgcaaatggcggtaaatagttggaa 2657
Query: 120 aggcatgatgtaccatgaaaaatagtatgtgaatatagttgcgaaaaaccccaatccgta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2656 aggcatgatgtaccatgaaaaatagtatgtgaatatagttgcgaaaaaccccaatccgta 2597
Query: 180 tagaacatgatgcaagtgatcgtgccacatgtttacggtgaaaagatgttccattctgtg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2596 tagaacatgatgcaagtgatcgtgccacatgtttacggtgaaaagatgttccattctgtg 2537
Query: 240 agagaactgcctggtgatggctctttcacactctacctctctatttctatcagaaaattg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2536 agagaactgcctggtgatggctctttcacactctacctctctatttctatcagaaaattg 2477
Query: 300 atcatgagaggtagatccacagaaacgtttcgatgccattggaaccatggctgcattatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2476 atcatgagaggtagatccacagaaacgtttcgatgccattggaaccatggctgcattatt 2417
Query: 360 acgagaatgtatcagagcaggctgtaataacaactgatttgtttcagcagttgagtcaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2416 acgagaatgtatcagagcaggctgtaataacaactgatttgtttcagcagttgagtcaga 2357
Query: 420 tccatgagtgttatcctcgtcataaatgtcctgcacattttgagtgatccctaatccctt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2356 tccatgagtgttatcctcgtcataaatgtcctgcacattttgagtgatccctaatccctt 2297
Query: 480 gtcgttaggaagtccaatttcactacctcttagaatgtcagcatctaaattagcagtatc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2296 gtcgttaggaagtccaatttcactacctcttagaatgtcagcatctaaattagcagtatc 2237
Query: 540 acccattgccaaatgatgagtaagatttgtacgagttctttgcaatgggaacccactatt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2236 acccattgccaaatgatgagtaagatttgtacgagttctttgcaatgggaacccactatt 2177
Query: 600 tgaagcaacgttgactaattggaaatcttcaacatcaggatccgagaaaatgtcagcaaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2176 tgaagcaacgttgactaattggaaatcttcaacatcaggatccgagaaaatgtcagcaaa 2117
Query: 660 actatgaatatcatcatcgtcttcgtttatgtccagtgtactttcttcttcagtagcatc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2116 actatgaatatcatcatcgtcttcgtttatgtccagtgtactttcttcttcagtagcatc 2057
Query: 720 ttcatccgcagaactgtatccattctcagcatcacgaagaatatcctctttactgccgag 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2056 ttcatccgcagaactgtatccattctcagcatcacgaagaatatcctctttactgccgag 1997
Query: 780 taaagaagtccgtttccttccattcgacctaccaaggtggccagtagccagtgc-aacag 838
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1996 taaagaagtccgtttccttccattcgacctaccaaggtggccagtagccagtgcaaacag 1937
Query: 839 cttttgaccaaatatagttacgtatgcyaaacaaaa 874
||||||||||||||||||||||||||| ||||||||
Sbjct: 1936 cttttgaccaaatatagttacgtatgccaaacaaaa 1901
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6423
Number of Sequences: 1807
Number of extensions: 6423
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 874
length of database: 10,358,551
effective HSP length: 16
effective length of query: 858
effective length of database: 10,329,639
effective search space: 8862830262
effective search space used: 8862830262
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)